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Nextstrain build for SARS-CoV-2
Created
2020-01-19
5,146 commits to master branch, last one 10 days ago
Rapid large-scale prokaryote pan genome analysis
Created
2013-04-18
930 commits to master branch, last one 2 years ago
AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.
Created
2018-09-28
802 commits to master branch, last one about a month ago
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Created
2009-09-30
5,443 commits to master branch, last one about a year ago
A tool to circularize genome assemblies
Created
2015-04-16
387 commits to master branch, last one about a year ago
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Created
2011-11-01
2,512 commits to master branch, last one 19 days ago
Antimicrobial Resistance Identification By Assembly
Created
2015-02-11
1,797 commits to master branch, last one about a year ago
Pathogen NGS Documentary
Created
2018-05-17
152 commits to main branch, last one 11 months ago
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Created
2022-02-18
2,145 commits to master branch, last one 12 days ago
Get assembly statistics from FASTA and FASTQ files
Created
2014-04-04
36 commits to master branch, last one about a year ago
Repository containing lists of all published ancient metagenomic (and related) samples and libraries
Created
2020-07-26
10,653 commits to master branch, last one 20 hours ago
This repository has no description...
Created
2015-11-12
396 commits to master branch, last one 4 years ago
Python3 scripts to manipulate FASTA and FASTQ files
Created
2013-09-06
309 commits to master branch, last one 4 months ago
Improve the quality of a denovo assembly by scaffolding and gap filling
Created
2012-08-15
384 commits to master branch, last one 4 years ago
de novo virus assembler of Illumina paired reads
Created
2014-04-30
299 commits to master branch, last one 4 years ago
Nextstrain build for mpox virus
Created
2022-05-19
923 commits to master branch, last one 6 days ago