4 results found Sort:

nextstrain
ncov nextstrain
406
1.4k
mit
75
Nextstrain build for SARS-CoV-2
ncov pathogen nextstrain sars-cov-2
Created 2020-01-19
5,146 commits to master branch, last one 9 days ago
hodcroftlab
covariants hodcroftlab
110
320
agpl-3.0
20
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
covid19 covid-19 mutation sarscov2 tracking variants nextstrain sars-cov-2 mutation-distribution
Created 2020-10-01
3,373 commits to master branch, last one 4 days ago
nextstrain
nextclade nextstrain
60
227
mit
19
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
dna rna ncov clade covid virus clades strain covid19 science covid-19 neherlab research influenza sequences nextstrain sars-cov-2 sequencing coronavirus next-generation-sequencing
Created 2020-06-12
6,473 commits to master branch, last one 3 days ago
nextstrain
mpox nextstrain
20
46
mit
17
Nextstrain build for mpox virus
mpox augur auspice genbank metadata pathogen pipeline monkeypox nextstrain phylogenetics bioinformatics virus-evolution genomic-epidemiology
Created 2022-05-19
923 commits to master branch, last one 5 days ago