4 results found Sort:

nextstrain
ncov nextstrain
404
1.4k
mit
75
Nextstrain build for novel coronavirus SARS-CoV-2
ncov pathogen nextstrain sars-cov-2
Created 2020-01-19
5,013 commits to master branch, last one 14 days ago
hodcroftlab
covariants hodcroftlab
113
316
agpl-3.0
20
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
covid19 covid-19 mutation sarscov2 tracking variants nextstrain sars-cov-2 mutation-distribution
Created 2020-10-01
3,095 commits to master branch, last one about a month ago
nextstrain
nextclade nextstrain
58
202
mit
18
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
dna rna ncov clade covid virus clades strain covid19 science covid-19 neherlab research influenza sequences nextstrain sars-cov-2 sequencing coronavirus next-generation-sequencing
Created 2020-06-12
6,237 commits to master branch, last one a day ago
nextstrain
mpox nextstrain
16
39
mit
17
Nextstrain build for mpox virus
mpox augur auspice genbank metadata pathogen pipeline monkeypox nextstrain phylogenetics bioinformatics virus-evolution genomic-epidemiology
Created 2022-05-19
841 commits to master branch, last one 5 days ago