4 results found Sort:

nextstrain
ncov nextstrain
403
1.4k
mit
77
Nextstrain build for novel coronavirus SARS-CoV-2
ncov pathogen nextstrain sars-cov-2
Created 2020-01-19
5,107 commits to master branch, last one a day ago
hodcroftlab
covariants hodcroftlab
111
317
agpl-3.0
20
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
covid19 covid-19 mutation sarscov2 tracking variants nextstrain sars-cov-2 mutation-distribution
Created 2020-10-01
3,132 commits to master branch, last one about a month ago
nextstrain
nextclade nextstrain
61
219
mit
20
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
dna rna ncov clade covid virus clades strain covid19 science covid-19 neherlab research influenza sequences nextstrain sars-cov-2 sequencing coronavirus next-generation-sequencing
Created 2020-06-12
6,428 commits to master branch, last one 8 days ago
nextstrain
mpox nextstrain
19
45
mit
18
Nextstrain build for mpox virus
mpox augur auspice genbank metadata pathogen pipeline monkeypox nextstrain phylogenetics bioinformatics virus-evolution genomic-epidemiology
Created 2022-05-19
907 commits to master branch, last one 19 hours ago