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111
320
agpl-3.0
21
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Created 2020-10-01
3,258 commits to master branch, last one 6 days ago
47
134
apache-2.0
11
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
Created 2017-04-10
1,196 commits to master branch, last one 29 days ago
Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory...
Created 2021-04-02
74 commits to stable branch, last one 2 years ago