4 results found Sort:

52
321
bsd-3-clause
12
Package for fetching metadata and downloading data from SRA/ENA/GEO
Created 2018-11-29
662 commits to develop branch, last one 2 days ago
75
164
mit
100
Pipeline to fetch metadata and raw FastQ files from public databases
Created 2021-06-03
1,079 commits to master branch, last one 11 months ago
15
59
gpl-3.0
41
An efficient way to convert gff3 annotation files into EMBL format ready to submit.
Created 2016-08-04
364 commits to master branch, last one 11 months ago
Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory...
Created 2021-04-02
74 commits to stable branch, last one 2 years ago