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52

315

bsd-3-clause

13

Package for fetching metadata and downloading data from SRA/ENA/GEO

ena sra ncbi-sra sratoolkit bioinformatics ncbi-sra-archive bioinformatics-pipeline

Created 2018-11-29

660 commits to develop branch, last one about a month ago

27

82

mit

7

Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.

conda python rna-seq bioconda ncbi-sra bioinformatics rna-seq-pipeline rna-seq-workflows bioinformatics-analysis bioinformatics-pipeline

Created 2019-11-23

816 commits to master branch, last one 3 years ago

2

48

mit

1

A homology-based, computationally lightweight pipeline for discovering genes in the absence of an assembly

homology ncbi-sra orthology phylogenetics bioinformatics bioinformatics-pipeline gene-sequence-retrieval

Created 2020-08-10

20 commits to master branch, last one 3 years ago