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Aggregate results from bioinformatics analyses across many samples into a single report.
Created
2015-08-04
6,677 commits to main branch, last one 4 days ago
Structural variation caller using third generation sequencing
Created
2015-10-25
403 commits to master branch, last one 9 days ago
A flexible pipeline for complete analysis of bacterial genomes
Created
2019-02-22
1,556 commits to master branch, last one 2 months ago
genes and genomes at your fingertips
Created
2016-12-16
770 commits to master branch, last one 7 days ago
Toolset for SV simulation, comparison and filtering
Created
2015-10-27
180 commits to master branch, last one about a year ago
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
Created
2016-09-01
668 commits to master branch, last one 3 years ago
Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.
Created
2018-12-24
441 commits to master branch, last one 7 months ago
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
Created
2020-04-26
845 commits to main branch, last one about a month ago
:rocket: seqfu - Sequece Fastx Utilities
Created
2020-11-26
593 commits to main branch, last one about a month ago
Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
Created
2019-11-23
816 commits to master branch, last one 3 years ago
🦠📇 Microbial genomes-to-report pipeline
Created
2019-12-10
1,882 commits to master branch, last one 6 days ago
