12 results found Sort:

605
1.2k
gpl-3.0
35
Aggregate results from bioinformatics analyses across many samples into a single report.
Created 2015-08-04
6,625 commits to main branch, last one 2 days ago
Structural variation caller using third generation sequencing
Created 2015-10-25
387 commits to master branch, last one 7 days ago
A flexible pipeline for complete analysis of bacterial genomes
Created 2019-02-22
1,556 commits to master branch, last one about a month ago
genes and genomes at your fingertips
Created 2016-12-16
769 commits to master branch, last one about a month ago
Toolset for SV simulation, comparison and filtering
Created 2015-10-27
180 commits to master branch, last one 11 months ago
40
293
mit
22
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
Created 2016-09-01
668 commits to master branch, last one 3 years ago
39
146
gpl-3.0
7
Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.
Created 2018-12-24
441 commits to master branch, last one 6 months ago
5
141
gpl-3.0
7
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
Created 2020-04-26
845 commits to main branch, last one 10 days ago
7
112
gpl-3.0
3
:rocket: seqfu - Sequece Fastx Utilities
Created 2020-11-26
593 commits to main branch, last one 7 days ago
Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
Created 2019-11-23
816 commits to master branch, last one 3 years ago
3
54
gpl-3.0
3
🦠📇 Microbial genomes-to-report pipeline
Created 2019-12-10
1,796 commits to master branch, last one 22 days ago
Chanjo provides a better way to analyze coverage data in clinical sequencing.
Created 2013-07-05
893 commits to master branch, last one 5 months ago