Search Results - RepositoryStats

334

1.8k

mit

50

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

qc ngs umi fastq polyg filter adapter merging overlap quality illumina trimming filtering splitting sequencing duplication preprocessing bioinformatics quality-control

Created 2017-10-31

448 commits to master branch, last one 2 months ago

QA_bible VladislavEremeev

662

1.8k

gpl-3.0

215

“Библия QA” - это обновляемая база знаний объемом 560+ страниц

faq faqs guides manual russian testing guidebook starterkit career-guide qaautomation starter-pack translations qa-automation testing-tools manual-testing quality-control quality-assurance quality-assistance quality-engineering

Created 2020-07-14

178 commits to master branch, last one 24 days ago

MultiQC MultiQC

586

1.2k

gpl-3.0

37

Aggregate results from bioinformatics analyses across many samples into a single report.

pypi python seqera multiqc analysis bioconda reporting vizualisation bioinformatics quality-control data-visualization

Created 2015-08-04

6,357 commits to main branch, last one 23 hours ago

qctools bavc

41

306

other

43

QCTools (Quality Control Tools for Video Preservation) is a free and open source software tool that helps users analyze and understand their digitized video files through use of audiovisual analytics ...

video preservation quality-control

Created 2013-07-20

2,130 commits to main branch, last one about a month ago

mriqc nipreps

128

284

apache-2.0

18

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

mri neuroimaging quality-control machine-learning quality-reporter

Created 2016-01-04

3,650 commits to master branch, last one 23 days ago

crowd-kit Toloka

15

204

other

13

Control the quality of your labeled data with the Python tools you already know.

crowd python toloka labeling annotation data-mining aggregations data-science crowdsourcing quality-control truth-inference

Created 2021-03-01

434 commits to main branch, last one 7 days ago

gwas_scripts JoniColeman

109

180

mit

20

Codebook from my GWAS cookbook

gwas imputation quality-control

Created 2015-02-03

282 commits to master branch, last one 2 years ago

coverageChecker exussum12

18

177

mit

11

Allows old code to use new standards

Created 2017-01-04

284 commits to master branch, last one a day ago

blobtools DRL

44

176

gpl-3.0

9

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

blobtools contamination visualisation genome-assembly quality-control

Created 2015-11-09

453 commits to master branch, last one 3 months ago

cli code-pushup

8

153

mit

3

A CLI to run all kinds of code quality measurements to align your team with company goals

analyzer analytics task-scheduler quality-control

Created 2023-08-16

1,009 commits to main branch, last one 4 days ago

afni afni

101

151

unknown

19

Official AFNI source and documentation

dwi mri fmri statistics fmri-analysis visualization anatomical-mri quality-control fmri-data-analysis statistical-inference

Created 2015-05-07

23,307 commits to master branch, last one a day ago

alfred tobiasrausch

12

134

bsd-3-clause

9

BAM Statistics, Feature Counting and Annotation

alfred quality sequencing insert-size read-counts quality-control feature-counting alignment-metrics coverage-distribution

Created 2016-02-25

765 commits to main branch, last one 8 days ago

os armbian

47

112

gpl-3.0

10

Armbian operating system rolling releases provides automated nightly builds of maintained targets

linux release automation distribution qa-automation quality-control version-control autotest-framework release-management

Created 2023-02-20

6,145 commits to main branch, last one 8 hours ago

ansvif oxagast

28

105

gpl-2.0

10

A Not So Very Intelligent Fuzzer: An advanced fuzzing framework designed to find vulnerabilities in C/C++ code.

fuzzer exploit fuzzing pentesting fuzz-testing vulnerability quality-control

Created 2015-03-15

444 commits to master branch, last one 3 years ago

kneaddata biobakery

27

101

other

8

Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

tools public bowtie2 biobakery kneaddata quality-control

Created 2020-04-07

589 commits to master branch, last one 22 days ago

quickNAT_pytorch ai-med

35

101

mit

9

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

ai pytorch bayesian biomarkers mri-images uncertainty neuroanatomy segmentation brain-imaging deep-learning computer-vision medical-imaging quality-control machine-learning convolutional-neural-networks

Created 2018-05-24

97 commits to master branch, last one 3 years ago

MRQy ccipd

27

93

bsd-3-clause-clear

5

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

mri python imaging medical-imaging medical-physics quality-control quality-metrics machine-learning quality-assurance medical-image-processing

Created 2019-10-08

342 commits to master branch, last one 6 days ago

visualqc raamana

13

72

apache-2.0

7

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

qc fmri cortex alignment freesurfer mri-images neuroimaging neuroscience registration anatomical-mri medical-imaging outlier-removal quality-control outlier-detection

Created 2017-10-06

665 commits to master branch, last one 7 days ago

dimRed gdkrmr

15

72

gpl-3.0

7

A Framework for Dimensionality Reduction in R

r framework visualization quality-control manifold-learning high-dimensional-data dimensionality-reduction

Created 2016-10-14

498 commits to master branch, last one about a year ago

QC Qoala-T

14

72

other

4

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

mri freesurfer quality-control machine-learning

Created 2018-03-21

409 commits to master branch, last one 3 years ago

ataqv ParkerLab

10

63

gpl-3.0

8

A toolkit for QC and visualization of ATAC-seq results.

tool atac-seq software visualization quality-control

Created 2015-11-10

72 commits to master branch, last one about a year ago

osm-revert Zaczero

5

60

agpl-3.0

6

⏪ OpenStreetMap Changeset Reverter — CLI + Website

python overpass-api openstreetmap quality-control diff-match-patch

Created 2023-01-05

170 commits to main branch, last one about a month ago

aibolit cqfn

17

50

unknown

9

Static Analyzer for Java Code with Machine Learning in Mind

quality-control static-analysis machine-learning machine-learning-algorithms

Created 2020-01-30

2,032 commits to master branch, last one 3 years ago

MHKiT-Python MHKiT-Software

45

46

bsd-3-clause

10

MHKiT-Python provides the marine renewable energy (MRE) community tools for data processing, visualization, quality control, resource assessment, and device performance.

mhkit python mhkit-python visualization quality-control marine-renewable-energy

Created 2019-12-17

659 commits to master branch, last one about a month ago

sagemaker-defect-detection awslabs

24

45

apache-2.0

9

Detect Defects in Products from their Images using Amazon SageMaker

sagemaker deep-learning computer-vision quality-control defect-detection sagemaker-pytorch sagemaker-deployment

Created 2020-08-18

59 commits to mainline branch, last one about a year ago