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Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets
Created
2015-11-09
453 commits to master branch, last one 3 months ago
Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
Created
2017-04-04
78 commits to master branch, last one 2 years ago
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
Created
2016-02-15
203 commits to master branch, last one about a month ago
Recentrifuge: robust comparative analysis and contamination removal for metagenomics
Created
2017-08-01
322 commits to master branch, last one 4 months ago
The LM Contamination Index is a manually created database of contamination evidences for LMs.
Created
2023-05-25
91 commits to main branch, last one 2 months ago
Detecting contamination in NGS data and multi-species analysis
Created
2018-08-06
83 commits to master branch, last one about a year ago
RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computation...
Created
2023-01-20
36 commits to main branch, last one about a month ago