benjjneb / decontam

Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data

Date Created 2017-04-04 (7 years ago)

Commits 78 (last one 3 years ago)

Stargazers 147 (0 this week)

Watchers 12 (0 this week)

Forks 25

License unknown

Ranking

RepositoryStats indexes 585,880 repositories, of these benjjneb/decontam is ranked #222,853 (62nd percentile) for total stargazers, and #177,706 for total watchers. Github reports the primary language for this repository as R, for repositories using this language it is ranked #987/3,350.

benjjneb/decontam is also tagged with popular topics, for these it's ranked: bioinformatics (#284/791)

Other Information

benjjneb/decontam has 1 open pull request on Github, 5 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 87 open issues and 60 closed issues.

There have been 2 releases, the latest one was published on 2021-06-30 (3 years ago) with the name decontam 1.12.

Homepage URL: https://benjjneb.github.io/decontam/

All Topics

amplicon microbiome metagenomics contamination metabarcoding bioinformatics

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The only known language in this repository is R

updated: 2024-11-14 @ 04:44am, id: 87143734 / R_kgDOBTG1Ng