4 results found Sort:

divonlan
genozip divonlan
12
161
other
1
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
bam bwa gvf sam vcf cram gzip bgzip fasta fastq 23andme genomics samtools compression
Created 2019-12-15
3,267 commits to master branch, last one 24 days ago
ngless-toolkit
ngless ngless-toolkit
25
144
other
11
NGLess: NGS with less work
bwa ngs fastq haskell science genomics samtools fastq-format metagenomics bioinformatics haskell-language bioinformatics-pipeline next-generation-sequencing
Created 2013-01-08
2,453 commits to main branch, last one 5 months ago
StevenWingett
FastQ-Screen StevenWingett
17
68
gpl-3.0
5
Detecting contamination in NGS data and multi-species analysis
bwa ngs fastq bowtie bowtie2 detection metagenomics contamination
Created 2018-08-06
86 commits to master branch, last one 4 months ago
4dn-dcic
docker-4dn-hic 4dn-dcic
18
59
mit
8
Docker for 4DN Hi-C processing pipeline
bwa hi-c cooler docker juicer pairix pairsqc bioinformatics
Created 2017-03-03
903 commits to master branch, last one 5 years ago