17 results found Sort:

rordenlab
dcm2niix rordenlab
229
869
other
37
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
gz dcm mri nii jpeg dicom nifti nitrc dcm2niix mricrogl research jpeg-image mri-images bids-format dicom-images neuroimaging neuroscience nifti-format
Created 2014-10-19
1,400 commits to master branch, last one about a month ago
adamkwolf
3d-nii-visualizer adamkwolf
31
164
mit
7
A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5
qt5 vtk mri-images brain-imaging 3d-visualization mri-applications
Created 2018-04-11
77 commits to master branch, last one 3 years ago
reactmed
neurdicom reactmed
35
145
unknown
6
RESTful PACS server with plugins
pacs dicom django tornado dicomweb mri-images tensorflow plugin-system medical-imaging medical-image-processing
Created 2018-02-08
117 commits to master branch, last one 4 years ago
neurolabusc
nii2mesh neurolabusc
17
142
other
6
Convert NIfTI volume to triangulated mesh using marching cubes
3d mri-images obj-format nifti-format marching-cubes medical-imaging mesh-generation mesh-simplification
Created 2022-01-15
21 commits to main branch, last one 22 days ago
ahmedbesbes
mrnet ahmedbesbes
38
124
mit
6
Building an ACL tear detector to spot knee injuries from MRIs with PyTorch (MRNet)
acl cnn mrnet tears pytorch stanford mri-exams mri-images deep-learning knee-injuries sagittal-plane computer-vision medical-imaging mri-applications pytorch-tutorial data-augmentation stanford-ml-group transfer-learning paper-implementations convolutional-neural-networks
Created 2019-04-17
109 commits to master branch, last one 5 years ago
Jfortin1
neuroCombat Jfortin1
37
119
mit
4
Harmonization of multi-site imaging data with ComBat (Python)
combat python mri-images neuroimaging harmonization normalization multi-site-imaging
Created 2020-05-16
38 commits to master branch, last one 3 years ago
ai-med
quickNAT_pytorch ai-med
35
101
mit
9
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
ai pytorch bayesian biomarkers mri-images uncertainty neuroanatomy segmentation brain-imaging deep-learning computer-vision medical-imaging quality-control machine-learning convolutional-neural-networks
Created 2018-05-24
97 commits to master branch, last one 3 years ago
TripleCoenzyme
ResNet50-Unet TripleCoenzyme
18
99
unknown
1
Segmentation for vertebra in MR images
u-net pytorch vertebra resnet-50 mri-images
Created 2019-08-02
5 commits to master branch, last one 3 years ago
amrzhd
MRISkullStripping amrzhd
0
88
mit
1
Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.
mri unet monai python nibabel pytorch mri-images image-segmentation unet-image-segmentation biomedical-image-processing
Created 2024-08-18
7 commits to main branch, last one 19 days ago
birogeri
kspace-explorer birogeri
11
74
unknown
5
⚕️ An educational tool to visualise k-space and aid the understanding of MRI image generation
mri kspace python mri-data mri-images image-analysis medical-imaging mri-reconstruction
Created 2020-02-04
55 commits to master branch, last one about a year ago
raamana
visualqc raamana
13
73
apache-2.0
7
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
qc fmri cortex alignment freesurfer mri-images neuroimaging neuroscience registration anatomical-mri medical-imaging outlier-removal quality-control outlier-detection
Created 2017-10-06
665 commits to master branch, last one 3 months ago
JuliaNeuroscience
NIfTI.jl JuliaNeuroscience
35
71
other
6
Julia module for reading/writing NIfTI MRI files
mri fmri julia nifti mri-images
Created 2013-01-20
145 commits to master branch, last one 7 months ago
sergivalverde
MRI_intensity_normalization sergivalverde
17
57
gpl-3.0
3
Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000
matlab landmark histogram mri-images intensity-normalization
Created 2016-04-03
17 commits to master branch, last one 2 years ago
tomaroberts
nii2dcm tomaroberts
14
56
other
4
nii2dcm: NIfTI to DICOM creation with Python
gz dcm mri nii dicom nifti imaging research mri-images dicom-images nifti-format file-conversion
Created 2021-04-24
251 commits to main branch, last one 7 months ago
DCAN-Labs
abcd-hcp-pipeline DCAN-Labs
19
49
bsd-3-clause
7
bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
fmri pipeline mri-images bids-format image-processing fmri-preprocessing
Created 2019-02-19
291 commits to main branch, last one 7 days ago
korbinian90
ROMEO korbinian90
0
40
unknown
5
Executables for ROMEO unwrapping for Linux, Windows and Mac OSX
qsm phase mri-images mri-reconstruction
Created 2020-05-13
61 commits to master branch, last one 9 months ago
DIAGNijmegen
prostateMR_3D-CAD-csPCa DIAGNijmegen
7
39
unknown
6
Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder structure with deep supervision (—𝘜𝘕𝘦𝘵++). Built in TensorFlow...
seresnet mri-images unetplusplus attention-unet prostate-cancer tensorflow-keras probabilistic-unet attention-mechanisms computer-aided-detection computer-aided-diagnosis
This repository has been archived (exclude archived)
Created 2021-01-19
186 commits to main branch, last one 2 years ago