7 results found Sort:

lgmgeo
AnnotSV lgmgeo
36
199
gpl-3.0
10
Annotation and Ranking of Structural Variation
sv cnv ngs ranking genetics annotation priorization
Created 2019-07-09
247 commits to master branch, last one about a month ago
ShixiangWang
sigminer ShixiangWang
18
137
other
2
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
r cnv dbs nmf sbs indel easy-to-use bayesian-nmf visualization bioinformatics nmf-extraction cancer-research somatic-variants cosmic-signatures somatic-mutations signature-extraction copynumber-signatures mutational-signatures
Created 2018-12-30
1,258 commits to master branch, last one 24 days ago
icbi-lab
infercnvpy icbi-lab
27
123
bsd-3-clause
3
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
cnv scverse single-cell
Created 2021-01-26
187 commits to main branch, last one 5 days ago
flowhub-team
CNV flowhub-team
0
59
mit
1
Copy Number Variation
cnv genome genomics copynumbervariation copy-number-variation
Created 2023-06-27
11 commits to main branch, last one about a year ago
Genotek
ClassifyCNV Genotek
14
59
other
8
ClassifyCNV: a tool for clinical annotation of copy-number variants
cnv deletion annotations duplication pathogenicity bioinformatics clinical-genomics copy-number-variation
Created 2020-07-15
21 commits to master branch, last one about a year ago
XWangLabTHU
cfDNApipe XWangLabTHU
30
57
other
4
cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data
cnv snv cfdna wgs-data wgbs-data cell-free-dna virus-detection
Created 2021-01-11
769 commits to master branch, last one 2 years ago
PacificBiosciences
HiFiCNV PacificBiosciences
5
33
bsd-3-clause-clear
5
Copy number variant caller and depth visualization utility for PacBio HiFi reads
cnv hifi pacbio-ccs
Created 2022-04-06
19 commits to main branch, last one 3 months ago