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SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in e...
Created 2018-08-30
461 commits to master branch, last one about a month ago
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
Created 2018-12-30
1,261 commits to master branch, last one 5 months ago
SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file)....
Created 2018-08-27
329 commits to master branch, last one 11 days ago
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An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
Created 2018-03-12
232 commits to master branch, last one 10 months ago