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SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in e...
Created 2018-08-30
450 commits to master branch, last one 6 months ago
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
Created 2018-12-30
1,261 commits to master branch, last one 26 days ago
SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file)....
Created 2018-08-27
309 commits to master branch, last one 26 days ago
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An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
Created 2018-03-12
232 commits to master branch, last one 5 months ago