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Signal-level algorithms for MinION data
Created
2014-12-17
1,479 commits to master branch, last one about a year ago
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
Created
2015-11-07
940 commits to master branch, last one 7 months ago
R package for DNA methylation analysis
Created
2013-12-24
1,049 commits to master branch, last one 9 months ago
A (mostly) universal methylation extractor for BS-seq experiments.
Created
2014-10-04
397 commits to master branch, last one about a year ago
Methylation/modified base calling separated from basecalling.
Created
2021-11-22
589 commits to master branch, last one about a month ago
A bioinformatics tool for working with modified bases
Created
2023-03-03
688 commits to master branch, last one about a month ago
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
Created
2019-04-04
2,298 commits to master branch, last one 6 days ago
Detecting methylation using signal-level features from Nanopore sequencing reads
Created
2018-12-11
209 commits to master branch, last one about a year ago
This repository has no description...
Created
2019-04-07
215 commits to master branch, last one 6 months ago
Arioc: GPU-accelerated DNA short-read alignment
Created
2014-12-08
192 commits to master branch, last one about a month ago
Detecting methylation using signal-level features from Nanopore sequencing reads of plants
Created
2019-11-19
146 commits to master branch, last one 4 months ago
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
Created
2017-07-14
290 commits to devel branch, last one about a month ago
MethPhaser: methylation-based haplotype phasing of human genomes
Created
2023-04-19
34 commits to main branch, last one about a year ago
DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads
Created
2022-05-02
82 commits to main branch, last one 2 months ago
A battery of methylation tools for PacBio HiFi reads
Created
2023-07-26
25 commits to main branch, last one 2 months ago