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Oxford Nanopore's Basecaller
Created
2022-05-17
6,298 commits to release-v0.8 branch, last one a day ago
A PyTorch Basecaller for Oxford Nanopore Reads
Created
2019-11-19
1,095 commits to master branch, last one 5 months ago
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output...
Created
2019-06-20
1,149 commits to master branch, last one about a year ago
Methylation/modified base calling separated from basecalling.
Created
2021-11-22
589 commits to master branch, last one about a month ago
Research release basecalling models and configurations
Created
2020-03-18
143 commits to master branch, last one 4 months ago
SARS-CoV-2 workflow for nanopore sequence data
Created
2020-03-25
710 commits to master branch, last one about a month ago
A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate
Created
2022-02-09
28 commits to main branch, last one 2 years ago