sirselim / guppy_parameter_optimiser

A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate

Date Created 2022-02-09 (2 years ago)

Commits 28 (last one 2 years ago)

Stargazers 31 (0 this week)

Watchers 3 (0 this week)

Forks 4

License gpl-3.0

Ranking

RepositoryStats indexes 579,238 repositories, of these sirselim/guppy_parameter_optimiser is ranked #550,618 (5th percentile) for total stargazers, and #420,216 for total watchers. Github reports the primary language for this repository as Shell, for repositories using this language it is ranked #14,567/15,208.

sirselim/guppy_parameter_optimiser is also tagged with popular topics, for these it's ranked: gpu (#868/894)

Other Information

sirselim/guppy_parameter_optimiser has Github issues enabled, there are 3 open issues and 2 closed issues.

Homepage URL: https://hackmd.io/@Miles/S12SKP115

All Topics

gpu guppy basecalling optimisation nanopore-sequencing

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

28 commits on the default branch (main) since jan '22

Yearly Commits

Commits to the default branch (main) per year

Issue History

Languages

The only known language in this repository is Shell

updated: 2024-01-17 @ 05:46am, id: 457200761 / R_kgDOG0BUeQ