4 results found Sort:

maxplanck-ie
snakepipes maxplanck-ie
87
394
unknown
20
Customizable workflows based on snakemake and python for the analysis of NGS data
ngs hi-c rna-seq atac-seq chip-seq workflow snakemake bisulfite-sequencing
Created 2016-03-23
4,059 commits to master branch, last one 5 months ago
nf-core
methylseq nf-core
151
160
mit
154
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
pbat rrbs em-seq nf-core nextflow pipeline workflow epigenome methyl-seq epigenomics dna-methylation bisulfite-sequencing
Created 2018-03-12
1,691 commits to master branch, last one 3 months ago
RWilton
Arioc RWilton
9
69
bsd-3-clause
6
Arioc: GPU-accelerated DNA short-read alignment
gpu cuda genomics c-plusplus methylation read-aligners bioinformatics variant-analysis sequence-alignment bisulfite-sequencing dna-sequence-alignment
Created 2014-12-08
195 commits to master branch, last one 2 months ago
kdkorthauer
dmrseq kdkorthauer
14
58
mit
9
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
dmr inference epigenetics methylation bioconductor bisulfite-sequencing
Created 2017-07-14
290 commits to devel branch, last one 5 months ago