7 results found Sort:

nf-core
methylseq nf-core
147
156
mit
150
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
pbat rrbs em-seq nf-core nextflow pipeline workflow epigenome methyl-seq epigenomics dna-methylation bisulfite-sequencing
Created 2018-03-12
1,691 commits to master branch, last one about a month ago
nloyfer
wgbs_tools nloyfer
39
139
other
11
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
methylation wgbs-analysis bioinformatics dna-methylation
Created 2019-04-04
2,307 commits to master branch, last one 14 days ago
yupenghe
methylpy yupenghe
47
138
apache-2.0
4
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
nome-seq epigenetics calling-dmrs nome-seq-data dna-methylation functional-genomics bioinformatics-pipeline differential-methylation
Created 2016-06-20
250 commits to methylpy branch, last one about a year ago
xie186
ViewBS xie186
27
85
gpl-3.0
7
ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data
bs-seq visualization dna-methylation cytosine-methylation-report
Created 2016-07-07
349 commits to master branch, last one 4 months ago
zwdzwd
sesame zwdzwd
35
68
other
7
🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips
microarray bioinformatics dna-methylation
Created 2018-02-19
1,165 commits to devel branch, last one 26 days ago
zhou-lab
biscuit zhou-lab
24
64
other
9
BISulfite-seq CUI Toolkit
bioinformatics dna-methylation sequence-alignment
Created 2015-06-24
658 commits to master branch, last one 16 days ago
dohlee
metheor dohlee
8
43
gpl-3.0
3
:comet: Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)
rust epigenomics bioinformatics dna-methylation computational-biology computational-epigenomics
Created 2021-09-23
123 commits to master branch, last one about a year ago