14 results found Sort:

ChIP-seq analysis notes from Ming Tang
Created 2015-06-12
364 commits to master branch, last one 5 months ago
271
718
bsd-3-clause
48
MACS -- Model-based Analysis of ChIP-Seq
Created 2011-03-02
1,675 commits to master branch, last one 2 months ago
215
692
other
43
Tools to process and analyze deep sequencing data.
Created 2013-07-08
3,515 commits to master branch, last one 10 days ago
Customizable workflows based on snakemake and python for the analysis of NGS data
Created 2016-03-23
4,059 commits to master branch, last one 3 months ago
A collection of Galaxy-related training material
Created 2015-06-29
29,688 commits to main branch, last one 3 days ago
76
233
unknown
20
:dart: ChIP peak Annotation, Comparison and Visualization
Created 2014-05-31
929 commits to devel branch, last one a day ago
149
203
mit
147
ChIP-seq peak-calling, QC and differential analysis pipeline.
Created 2018-04-24
1,835 commits to master branch, last one 3 months ago
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
Created 2019-07-11
1,483 commits to master branch, last one 12 months ago
20
109
unknown
5
Publication quality NGS track plotting
Created 2019-11-14
334 commits to master branch, last one 2 years ago
30
108
other
10
Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
Created 2015-06-17
2,898 commits to master branch, last one about a year ago
40
106
bsd-3-clause
40
AQUAS TF and histone ChIP-seq pipeline
Created 2015-07-16
811 commits to master branch, last one 6 years ago
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
Created 2022-10-12
1,105 commits to master branch, last one 8 months ago
Multi-omics analysis protocols by Lyu.
Created 2021-03-08
49 commits to main branch, last one about a year ago
Extract Sequence from Genome According to Annotation File
Created 2023-03-03
82 commits to master branch, last one 26 days ago