7 results found Sort:

LengerichLab
CompBioDatasetsForMachineLearning LengerichLab
24
159
unknown
9
A Curated List of Computational Biology Datasets Suitable for Machine Learning
dataset datasets curated-list machine-learning computational-biology biomedical-data-science computational-biology-datasets
Created 2016-10-24
47 commits to master branch, last one 8 months ago
aangelopoulos
im2im-uq aangelopoulos
10
53
mit
4
Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.
mri unet pytorch microscopy uncertainty machine-learning quantile-regression computational-biology computational-imaging uncertainty-estimation biomedical-data-science image-to-image-translation uncertainty-quantification biomedical-image-processing
Created 2021-05-30
152 commits to main branch, last one about a year ago
BorgwardtLab
S3M BorgwardtLab
8
52
mit
6
A software package for statistically significant shapelet mining
shapelets biomedical time-series time-series-analysis biomedical-data-science time-series-analysis-tool significant-pattern-mining
Created 2018-03-05
325 commits to master branch, last one 2 years ago
beasygo1ng
OCT-Retinal-Layer-Segmenter beasygo1ng
6
51
unknown
3
UNet based model that segment retina to 8 layers in OCT images
images python segmentation deep-learning neural-networks keras-tensorflow machine-learning image-segmentation deep-neural-networks biomedical-data-science computer-vision-algorithms retinal-layer-segmentation biomedical-image-processing
Created 2022-06-20
18 commits to master branch, last one about a year ago
epigen
atacseq_pipeline epigen
2
48
mit
3
Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
ngs bash python atac-seq pipeline workflow snakemake bioinformatics biomedical-data-science
Created 2021-03-22
172 commits to main branch, last one a day ago
nikolamilosevic86
verifAI nikolamilosevic86
2
40
agpl-3.0
3
VerifAI initiative to build open-source easy-to-deploy generative question-answering engine that can reference and verify answers for correctness (using posteriori model)
llm nli nlp qlora bioasq openai pubmed qdrant medline scifact mistral-7b opensearch verification deep-learning machine-learning nlp-machine-learning biomedical-data-science hallucination-detection natural-language-processing
Created 2023-05-23
299 commits to main branch, last one 3 days ago
jvwilliams23
pyssam jvwilliams23
2
30
agpl-3.0
4
A Python library for biomedical statistical shape and appearance modelling.
python biomedical-data-science statistical-shape-model biomedical-image-processing
Created 2022-12-09
105 commits to main branch, last one 6 months ago