4 results found Sort:

deeptools
HiCExplorer deeptools
70
237
gpl-3.0
14
HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
hic galaxy python genomics bioinformatics chromosome-conformation-capture
Created 2015-02-16
3,138 commits to master branch, last one 2 months ago
marbl
SALSA marbl
47
183
mit
20
SALSA: A tool to scaffold long read assemblies with Hi-C data
hic assembly scaffold long-read
Created 2016-06-06
113 commits to master branch, last one 8 months ago
junjunlab
BioSeqUtils junjunlab
3
31
other
2
Extract Sequence from Genome According to Annotation File
gtf hic genome atac-seq chip-seq merip-seq transcript coverage-plot
Created 2023-03-03
82 commits to master branch, last one 29 days ago
paulsengroup
hictk paulsengroup
1
28
mit
2
Blazing fast toolkit to work with .hic and .cool files
cxx hic hi-c cxx17 hictk cooler conversion cxx-library bioinformatics cli-application
Created 2023-06-07
1,715 commits to main branch, last one about a month ago