4 results found Sort:

macs3-project
MACS macs3-project
270
691
bsd-3-clause
49
MACS -- Model-based Analysis of ChIP-Seq
macs python atac-seq chip-seq dnase-seq peak-caller poisson-equation
Created 2011-03-02
1,626 commits to master branch, last one about a month ago
kundajelab
atac_dnase_pipelines kundajelab
81
159
bsd-3-clause
48
ATAC-seq and DNase-seq processing pipeline
atac-seq dnase-seq bioinformatics-pipeline
Created 2016-02-28
913 commits to master branch, last one 4 years ago
GreenleafLab
chromVAR GreenleafLab
36
143
other
21
chromatin Variability Across Regions (of the genome!)
r atac-seq dnase-seq bioinformatics
Created 2015-11-21
281 commits to master branch, last one 4 years ago
CostaLab
reg-gen CostaLab
30
101
other
12
Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
ngs motif atac-seq chip-seq genomics dnase-seq footprinting bioinformatics motif-analysis differential-peak-calling
Created 2015-06-17
2,898 commits to master branch, last one 8 months ago