vanheeringen-lab / seq2science

Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.

Date Created 2019-07-11 (5 years ago)

Commits 1,483 (last one about a year ago)

Stargazers 156 (0 this week)

Watchers 4 (0 this week)

Forks 28

License mit

Ranking

RepositoryStats indexes 632,869 repositories, of these vanheeringen-lab/seq2science is ranked #225,115 (64th percentile) for total stargazers, and #366,084 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #41,528/129,221.

vanheeringen-lab/seq2science is also tagged with popular topics, for these it's ranked: bioinformatics (#282/846), pipeline (#177/459), workflows (#91/186)

Other Information

vanheeringen-lab/seq2science has 3 open pull requests on Github, 623 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 23 open issues and 318 closed issues.

There have been 47 releases, the latest one was published on 2024-02-05 (about a year ago) with the name Release v1.2.2.

Homepage URL: https://vanheeringen-lab.github.io/seq2science

All Topics

ngs sra fastq rna-seq atac-seq chip-seq pipeline snakemake workflows bioinformatics reproducible-research bioinformatics-pipeline

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

302 commits on the default branch (master) since jan '22

Yearly Commits

Commits to the default branch (master) per year

Issue History

Languages

The primary language is Python but there's also others...

Opengraph Image

updated: 2025-03-16 @ 07:54am, id: 196379320 / R_kgDOC7SCuA