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MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
Created
2015-03-30
3,957 commits to develop branch, last one a day ago
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
Created
2019-02-26
683 commits to master branch, last one 6 months ago
📚 Tools and databases for analyzing HLA and VDJ genes.
Created
2020-01-08
73 commits to master branch, last one 4 months ago
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
Created
2018-06-25
1,481 commits to master branch, last one 3 months ago
🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!
Created
2016-01-06
918 commits to master branch, last one 22 days ago
Post-analysis of immune repertoire sequencing data
Created
2014-06-06
838 commits to master branch, last one 4 months ago
A collaborative review of the emerging COVID-19 literature. Join the chat here:
Created
2020-03-20
6,559 commits to master branch, last one 7 months ago
Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data
Created
2018-11-03
1,005 commits to master branch, last one 2 years ago
Precision HLA typing from next-generation sequencing data
Created
2018-07-11
430 commits to master branch, last one about a year ago
Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info
Created
2018-11-09
131 commits to main branch, last one 6 months ago
IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
Created
2017-12-25
495 commits to master branch, last one 3 years ago