5 results found Sort:

oushujun
EDTA oushujun
70
315
gpl-3.0
9
Extensive de-novo TE Annotator
pipeline benchmarking genome-annotation transposable-elements
Created 2019-05-23
759 commits to master branch, last one 4 months ago
TobyBaril
EarlGrey TobyBaril
18
125
other
5
Earl Grey: A fully automated TE curation and annotation pipeline
genomics bioinformatics te-annotations genome-analysis genome-annotation transposable-elements
Created 2021-09-30
490 commits to main branch, last one 2 days ago
parklab
xTea parklab
19
87
other
9
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
pacbio illumina nanopore linked-reads transposable-elements mobile-element-insertion
Created 2018-07-12
144 commits to master branch, last one about a year ago
hyunhwan-jeong
SalmonTE hyunhwan-jeong
23
80
gpl-3.0
9
SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
salmon pipeline ngs-analysis transposable-elements
Created 2017-08-01
93 commits to main branch, last one about a year ago
clemgoub
TE-Aid clemgoub
6
38
unknown
2
Annotation helper tool for the manual curation of transposable element consensus sequences
ltr tir blast protein dot-plot structure annotation transposons bioinformatics-tool transposable-elements
Created 2021-04-28
123 commits to main branch, last one about a month ago