nf-core / cutandrun

Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

Date Created 2021-01-14 (4 years ago)

Commits 1,700 (last one about a year ago)

Stargazers 89 (0 this week)

Watchers 168 (10 this week)

Forks 50

License mit

Ranking

RepositoryStats indexes 631,351 repositories, of these nf-core/cutandrun is ranked #331,362 (48th percentile) for total stargazers, and #8,967 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #35/87.

nf-core/cutandrun is also tagged with popular topics, for these it's ranked: workflow (#470/757), pipeline (#252/457)

Other Information

nf-core/cutandrun has 5 open pull requests on Github, 92 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 30 open issues and 101 closed issues.

There have been 8 releases, the latest one was published on 2024-02-01 (about a year ago) with the name nf-core/cutandrun v3.2.2 Iridium Ibis.

Homepage URL: https://nf-co.re/cutandrun

All Topics

nf-core nextflow pipeline workflow cutandrun cutandtag cutandrun-seq cutandtag-seq

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Recent Commit History

739 commits on the default branch (master) since jan '22

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The primary language is Nextflow but there's also others...

updated: 2025-03-24 @ 10:35am, id: 329599223 / R_kgDOE6VI9w