nf-core / isoseq

Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.

Date Created 2022-06-03 (2 years ago)

Commits 191 (last one 6 months ago)

Stargazers 37 (0 this week)

Watchers 86 (0 this week)

Forks 18

License mit

Ranking

RepositoryStats indexes 625,486 repositories, of these nf-core/isoseq is ranked #557,263 (11th percentile) for total stargazers, and #21,655 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #75/85.

nf-core/isoseq is also tagged with popular topics, for these it's ranked: workflow (#711/751), pipeline (#423/454)

Other Information

nf-core/isoseq has 2 open pull requests on Github, 17 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 6 open issues and 5 closed issues.

There have been 8 releases, the latest one was published on 2024-09-05 (6 months ago) with the name nf-core/isoseq v2.0.0 - Sapphire Duck [05/09/2024].

Homepage URL: https://nf-co.re/isoseq

All Topics

rna tama ultra isoseq nf-core isoseq-3 nextflow pipeline workflow

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Recent Commit History

191 commits on the default branch (master) since jan '22

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Languages

The primary language is Nextflow but there's also others...

updated: 2025-03-08 @ 05:41am, id: 499464196 / R_kgDOHcU4BA