refresh-bio / vclust

Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes

Date Created 2023-08-30 (about a year ago)

Commits 47 (last one 4 months ago)

Stargazers 58 (0 this week)

Watchers 3 (0 this week)

Forks 2

License gpl-3.0

Ranking

RepositoryStats indexes 641,731 repositories, of these refresh-bio/vclust is ranked #449,147 (30th percentile) for total stargazers, and #421,530 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #87,947/131,904.

refresh-bio/vclust is also tagged with popular topics, for these it's ranked: clustering (#301/383)

Other Information

refresh-bio/vclust has Github issues enabled, there are 4 open issues and 8 closed issues.

There have been 12 releases, the latest one was published on 2024-12-20 (4 months ago) with the name v1.3.0: Add the deduplicate command; improve verbosity; add more tests.

All Topics

viruses clustering dereplication bacteriophages genome-sequence sequence-similarity taxonomic-classification average-nucleotide-identity

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Recent Commit History

47 commits on the default branch (main) since jan '22

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Languages

The primary language is Python but there's also others...

updated: 2025-03-21 @ 12:05am, id: 684955735 / R_kgDOKNOYVw