Search Results - RepositoryStats

54

186

mit

11

Application and Python module for average nucleotide identity analyses of microbes.

ani taxonomy bioinformatics classification taxonomy-assignment average-nucleotide-identity

Created 2014-12-30

2,028 commits to master branch, last one 2 months ago

8

149

mit

5

Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.

rust metagenomics bioinformatics average-nucleotide-identity

Created 2022-11-14

297 commits to main branch, last one a day ago

5

119

mit

2

ultrafast genome querying and taxonomic profiling for metagenomic samples by abundance-corrected minhash.

k-mer metagenomics sketching-algorithm taxonomic-classification average-nucleotide-identity

Created 2023-05-06

243 commits to main branch, last one 2 months ago

1

31

bsd-3-clause

1

skDER: efficient & high-resolution dereplication of microbial genomes to select representatives for comparative genomics and metagenomics.

genomics strain-clustering genome-dereplication representative-genome average-nucleotide-identity

Created 2023-07-22

95 commits to main branch, last one about a month ago