raufs / skDER

skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes to select representatives for comparative genomics and metagenomics.

Date Created 2023-07-22 (about a year ago)

Commits 148 (last one 23 days ago)

Stargazers 40 (0 this week)

Watchers 1 (0 this week)

Forks 3

License bsd-3-clause

Ranking

RepositoryStats indexes 584,777 repositories, of these raufs/skDER is ranked #513,092 (12th percentile) for total stargazers, and #536,275 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #99,528/116,437.

raufs/skDER is also tagged with popular topics, for these it's ranked: genomics (#298/312)

Other Information

There have been 21 releases, the latest one was published on 2024-10-03 (about a month ago) with the name v1.2.8.

All Topics

genomics strain-clustering genome-dereplication representative-genome average-nucleotide-identity

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Recent Commit History

148 commits on the default branch (main) since jan '22

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Languages

The primary language is Python but there's also others...

updated: 2024-11-05 @ 02:30pm, id: 669528161 / R_kgDOJ-gwYQ