cgroza / GraffiTE

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

Date Created 2022-03-09 (2 years ago)

Commits 461 (last one 16 days ago)

Stargazers 119 (1 this week)

Watchers 4 (0 this week)

Forks 6

License other

Ranking

RepositoryStats indexes 585,880 repositories, of these cgroza/GraffiTE is ranked #258,468 (56th percentile) for total stargazers, and #373,729 for total watchers. Github reports the primary language for this repository as R, for repositories using this language it is ranked #1,212/3,350.

cgroza/GraffiTE is also tagged with popular topics, for these it's ranked: bioinformatics (#345/791)

Other Information

cgroza/GraffiTE has Github issues enabled, there are 7 open issues and 34 closed issues.

There have been 4 releases, the latest one was published on 2024-05-29 (5 months ago) with the name GraffiTE - publication freeze.

All Topics

transposons bioinformatics structural-variation

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461 commits on the default branch (main) since jan '22

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updated: 2024-11-21 @ 07:34pm, id: 468084645 / R_kgDOG-ZnpQ