cgroza / GraffiTE

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

Date Created 2022-03-09 (2 years ago)
Commits 509 (last one 16 days ago)
Stargazers 159 (2 this week)
Watchers 4 (0 this week)
Forks 8
License other
Ranking

RepositoryStats indexes 618,350 repositories, of these cgroza/GraffiTE is ranked #218,530 (65th percentile) for total stargazers, and #382,403 for total watchers. Github reports the primary language for this repository as R, for repositories using this language it is ranked #942/3,471.

cgroza/GraffiTE is also tagged with popular topics, for these it's ranked: bioinformatics (#269/834)

Other Information

cgroza/GraffiTE has Github issues enabled, there are 12 open issues and 38 closed issues.

There have been 4 releases, the latest one was published on 2024-05-29 (8 months ago) with the name GraffiTE - publication freeze.

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Recent Commit History

509 commits on the default branch (main) since jan '22

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Languages

The primary language is R but there's also others...

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updated: 2025-02-20 @ 10:26pm, id: 468084645 / R_kgDOG-ZnpQ