interactivereport / cellxgene_VIP

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

Date Created 2020-05-06 (4 years ago)

Commits 694 (last one 6 months ago)

Stargazers 135 (0 this week)

Watchers 6 (0 this week)

Forks 47

License mit

Ranking

RepositoryStats indexes 597,394 repositories, of these interactivereport/cellxgene_VIP is ranked #239,835 (60th percentile) for total stargazers, and #301,014 for total watchers. Github reports the primary language for this repository as HTML, for repositories using this language it is ranked #5,857/15,540.

interactivereport/cellxgene_VIP is also tagged with popular topics, for these it's ranked: visualization (#887/1593), svg (#586/1009)

Other Information

interactivereport/cellxgene_VIP has 2 open pull requests on Github, 1 pull request has been merged over the lifetime of the repository.

Github issues are enabled, there are 11 open issues and 92 closed issues.

There have been 12 releases, the latest one was published on 2024-02-27 (10 months ago) with the name v3.1.

Homepage URL: https://cellxgenevip-ms.bxgenomics.com

All Topics

svg scanpy seurat cellxgene scrna-seq cellxgene-vip visualization publication-quality-plots

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129 commits on the default branch (master) since jan '22

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The primary language is HTML but there's also others...

updated: 2024-12-19 @ 11:33pm, id: 261638493 / R_kgDOD5hJXQ