owkin / PyDESeq2

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

owkin
owkin
Date Created 2022-11-22 (2 years ago)
Commits 349 (last one 4 days ago)
Stargazers 639 (2 this week)
Watchers 11 (0 this week)
Forks 73
License mit
Ranking

RepositoryStats indexes 638,253 repositories, of these owkin/PyDESeq2 is ranked #79,131 (88th percentile) for total stargazers, and #186,748 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #13,053/130,824.

owkin/PyDESeq2 is also tagged with popular topics, for these it's ranked: python (#4,157/23575),  bioinformatics (#58/855)

Other Information

owkin/PyDESeq2 has 6 open pull requests on Github, 214 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 36 open issues and 111 closed issues.

There have been 26 releases, the latest one was published on 2025-01-13 (2 months ago) with the name v0.5.0.

Homepage URL: https://pydeseq2.readthedocs.io/en/stable/

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Recent Commit History

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updated: 2025-04-11 @ 02:39pm, id: 569371342 / R_kgDOIe_qzg