rcedgar / muscle

Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

Date Created 2021-06-19 (3 years ago)

Commits 204 (last one 2 months ago)

Stargazers 208 (0 this week)

Watchers 6 (0 this week)

Forks 23

License gpl-3.0

Ranking

RepositoryStats indexes 579,555 repositories, of these rcedgar/muscle is ranked #172,759 (70th percentile) for total stargazers, and #296,754 for total watchers. Github reports the primary language for this repository as C++, for repositories using this language it is ranked #9,734/31,036.

rcedgar/muscle is also tagged with popular topics, for these it's ranked: algorithms (#421/1001), bioinformatics (#202/786)

Other Information

rcedgar/muscle has Github issues enabled, there are 3 open issues and 70 closed issues.

There have been 4 releases, the latest one was published on 2024-08-22 (2 months ago) with the name Version 5.2 with support for protein structure alignment.

Homepage URL: https://drive5.com/muscle

All Topics

biology algorithms bioinformatics sequence-search protein-alignment protein-structure sequence-clustering nucleotide-alignment protein-structure-alignment

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Recent Commit History

133 commits on the default branch (main) since jan '22

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Languages

The primary language is C++ but there's also others...

updated: 2024-11-05 @ 07:49pm, id: 378508080 / R_kgDOFo-TMA