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2.7k

8.7k

apache-2.0

52

OpenMMLab Semantic Segmentation Toolbox and Benchmark.

pspnet pytorch deeplabv3 transformer swin-transformer image-segmentation vessel-segmentation realtime-segmentation semantic-segmentation medical-image-segmentation retinal-vessel-segmentation

Created 2020-06-14

989 commits to main branch, last one 12 months ago

RVGAN SharifAmit

20

91

bsd-3-clause

2

[MICCAI'21] [Tensorflow] Retinal Vessel Segmentation using a Novel Multi-scale Generative Adversarial Network

gan keras fundus miccai tensorflow conditional-gan medical-imaging retinal-diseases vessel-segmentation fundus-image-analysis medical-image-analysis medical-image-segmentation retinal-vessel-segmentation generative-adversarial-network generative-adversarial-networks

Created 2020-09-23

66 commits to master branch, last one 2 years ago

deepdyn sraashis

22

63

mit

4

pytorch implementation of paper https://www.frontiersin.org/articles/10.3389/fcomp.2020.00035/full

unet u-net pytorch fundus-image multiple-gpu computer-vision image-procesing cross-validation graph-algorithms machine-learning custom-dataloader vessel-segmentation pytorch-vizualization pytorch-implementation custom-data-loader-pytorch retinal-vessel-segmentation universal-pytorch-framework centralized-image-processing convolutional-neural-networks

Created 2017-09-11

1,274 commits to master branch, last one 4 years ago

ITKTubeTK InsightSoftwareConsortium

58

52

apache-2.0

3

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

python neuroscience jupyter-notebook image-registration vessel-segmentation medical-image-processing

Created 2012-11-08

6,676 commits to main branch, last one 3 days ago

VesselExpress RUB-Bioinf

6

47

gpl-3.0

5

🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes

docker snakemake 3d-imaging 3d-skeleton bioinformatics graph-analysis high-throughput vessel-segmentation light-sheet-microscopy

Created 2020-04-16

121 commits to master branch, last one 9 months ago

EM-BPL-Semi-Seg moucheng2017

1

39

unknown

1

[MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation

lung brats miccai bayesian miccai2022 robustness miccai-2022 em-algorithm segmentation computervision computer-vision adversarial-attacks out-of-distribution vessel-segmentation variational-inference medical-image-computing expectation-maximization semi-supervised-learning

Created 2022-05-24

41 commits to main branch, last one 4 days ago

AFN TY-Shi

0

31

unknown

1

Affinity Feature Strengthening for Accurate, Complete and Robust Vessel Segmentation(JBHI)

image-segmentation vessel-segmentation

Created 2022-09-02

13 commits to main branch, last one about a year ago