Trending repositories for topic bioinformatics-pipeline
Robust, flexible and resource-efficient pipelines using Go and the commandline
Robust, flexible and resource-efficient pipelines using Go and the commandline
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Robust, flexible and resource-efficient pipelines using Go and the commandline
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
Robust, flexible and resource-efficient pipelines using Go and the commandline
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Robust, flexible and resource-efficient pipelines using Go and the commandline
Package for fetching metadata and downloading data from SRA/ENA/GEO
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
Package for fetching metadata and downloading data from SRA/ENA/GEO
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Robust, flexible and resource-efficient pipelines using Go and the commandline
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Robust, flexible and resource-efficient pipelines using Go and the commandline
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Package for fetching metadata and downloading data from SRA/ENA/GEO
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis by using GATK and Sentieon. 一个基于 GATK 和 Sentieon 的简易且全面的 WGS...
Portable solution to generate genome alignment chains using lastz
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
Analyze your RNA sequencing data without writing a single line of code
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Portable solution to generate genome alignment chains using lastz
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis by using GATK and Sentieon. 一个基于 GATK 和 Sentieon 的简易且全面的 WGS...
From annotated genomes to metabolic screening in large scale microbiotas
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories
A lightweight and powerful Julia package for computational pipelines and workflows.
Analyze your RNA sequencing data without writing a single line of code