Trending repositories for topic bioinformatics-pipeline
Compute over Data framework for public, transparent, and optionally verifiable computation
Compute over Data framework for public, transparent, and optionally verifiable computation
Compute over Data framework for public, transparent, and optionally verifiable computation
Compute over Data framework for public, transparent, and optionally verifiable computation
Compute over Data framework for public, transparent, and optionally verifiable computation
Robust, flexible and resource-efficient pipelines using Go and the commandline
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
Package for fetching metadata and downloading data from SRA/ENA/GEO
A language and runtime for distributed, incremental data processing in the cloud
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Compute over Data framework for public, transparent, and optionally verifiable computation
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
Robust, flexible and resource-efficient pipelines using Go and the commandline
Package for fetching metadata and downloading data from SRA/ENA/GEO
A language and runtime for distributed, incremental data processing in the cloud
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Compute over Data framework for public, transparent, and optionally verifiable computation
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Robust, flexible and resource-efficient pipelines using Go and the commandline
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Portable solution to generate genome alignment chains using lastz
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Package for fetching metadata and downloading data from SRA/ENA/GEO
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
Analyze your RNA sequencing data without writing a single line of code
A language and runtime for distributed, incremental data processing in the cloud
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
Portable solution to generate genome alignment chains using lastz
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or l...
Compute over Data framework for public, transparent, and optionally verifiable computation
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
From annotated genomes to metabolic screening in large scale microbiotas
A lightweight and powerful Julia package for computational pipelines and workflows.
Repositório do grupo de estudo de Bioinformática da rede de comunidades das PyLadies Brasil.
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
Analyze your RNA sequencing data without writing a single line of code
Variant Calling Pipeline Using GATK4 and Nextflow