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Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Created
2015-08-06
4,751 commits to main branch, last one 16 days ago
Complete Matlab pipeline for large scale calcium imaging data analysis
Created
2015-04-22
640 commits to master branch, last one about a year ago
Matlab routines for online non-rigid motion correction of calcium imaging data
Created
2016-12-02
156 commits to master branch, last one 5 years ago
Calibrated inference of spiking from calcium ΔF/F data using deep networks
Created
2020-02-17
419 commits to master branch, last one 11 days ago
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysi...
Created
2018-12-11
386 commits to master branch, last one 2 months ago
Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.
Created
2022-11-15
107 commits to main branch, last one 7 months ago
High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
Created
2022-04-13
595 commits to master branch, last one 3 months ago
Platform for Calcium Imaging analysis. DEPRECATED.
This repository has been archived
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Created
2018-01-14
2,530 commits to master branch, last one about a year ago
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
Created
2021-11-11
16 commits to master branch, last one about a year ago
calcium imaging pipeline tool
Created
2021-08-17
2,818 commits to main branch, last one 14 days ago