4 results found Sort:

gustaveroussy
sopa gustaveroussy
15
137
bsd-3-clause
7
Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoCycler / MACSima / etc)
pipeline snakemake spatialdata spatial-omics generalization memory-management multiplexed-imaging spatial-transcriptomics
Created 2023-09-04
876 commits to master branch, last one 16 days ago
angelolab
ark-analysis angelolab
26
75
mit
10
Integrated pipeline for multiplexed image analysis
python multiplexed-imaging
Created 2019-01-07
735 commits to main branch, last one 20 days ago
camlab-bioml
astir camlab-bioml
11
49
gpl-2.0
6
astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨
machine-learning multiplexed-imaging imaging-mass-cytometry
Created 2020-05-04
710 commits to master branch, last one 5 months ago
mahmoodlab
MAPS mahmoodlab
9
48
other
3
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
mpif cell-annotation multiplexed-imaging
Created 2023-04-10
9 commits to main branch, last one 7 months ago