digo4 / Clinical-Genomics

Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline

Date Created 2023-12-22 (10 months ago)

Commits 69 (last one 9 months ago)

Stargazers 36 (0 this week)

Watchers 3 (0 this week)

Forks 11

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RepositoryStats indexes 579,555 repositories, of these digo4/Clinical-Genomics is ranked #528,212 (9th percentile) for total stargazers, and #420,420 for total watchers. Github reports the primary language for this repository as Shell, for repositories using this language it is ranked #14,030/15,221.

All Topics

fastp gatk4 fastqc picard bowtie2 bwa-mem varscan bcftools cutadapt gatk-cnv samtools freebayes trimgalore trimmomatic gatk-bestpractices gatk4-haplotypecaller gatk-joint-variant-calling-workflow

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69 commits on the default branch (main) since jan '22

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updated: 2024-11-05 @ 09:41am, id: 734680576 / R_kgDOK8pWAA