2 results found Sort:

davetang
learning_vcf_file davetang
40
138
mit
10
Learning the Variant Call Format
vcf gatk bcftools vcftools vcf-files vcf-format call-variants multi-sample-vcf
Created 2015-06-05
172 commits to main branch, last one 10 months ago
digo4
Clinical-Genomics digo4
11
39
mit
3
Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline
fastp gatk4 fastqc picard bowtie2 bwa-mem varscan bcftools cutadapt gatk-cnv samtools freebayes trimgalore trimmomatic gatk-bestpractices gatk4-haplotypecaller gatk-joint-variant-calling-workflow
Created 2023-12-22
69 commits to main branch, last one about a year ago