moiexpositoalonsolab / grenepipe

A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles.

Date Created 2020-05-06 (4 years ago)

Commits 589 (last one 16 days ago)

Stargazers 95 (0 this week)

Watchers 4 (0 this week)

Forks 21

License gpl-3.0

Ranking

RepositoryStats indexes 599,932 repositories, of these moiexpositoalonsolab/grenepipe is ranked #306,186 (49th percentile) for total stargazers, and #378,864 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #57,223/120,502.

Other Information

moiexpositoalonsolab/grenepipe has Github issues enabled, there are 3 open issues and 56 closed issues.

There have been 22 releases, the latest one was published on 2024-12-16 (17 days ago) with the name grenepipe v0.13.4.

Homepage URL: http://grene-net.org

All Topics

snakemake ancient-dna variant-calls pool-sequencing variant-calling snakemake-workflow population-genetics evolve-and-resequence genomic-variant-calling

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281 commits on the default branch (master) since jan '22

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updated: 2024-12-21 @ 02:02am, id: 261610578 / R_kgDOD5fcUg