moiexpositoalonsolab / grenepipe

A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles.

Date Created 2020-05-06 (4 years ago)

Commits 567 (last one about a month ago)

Stargazers 93 (0 this week)

Watchers 4 (0 this week)

Forks 21

License gpl-3.0

Ranking

RepositoryStats indexes 585,332 repositories, of these moiexpositoalonsolab/grenepipe is ranked #305,188 (48th percentile) for total stargazers, and #373,585 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #56,642/116,570.

Other Information

moiexpositoalonsolab/grenepipe has Github issues enabled, there are 7 open issues and 51 closed issues.

There have been 19 releases, the latest one was published on 2024-07-19 (4 months ago) with the name grenepipe v0.13.1.

Homepage URL: http://grene-net.org

All Topics

snakemake ancient-dna variant-calls pool-sequencing variant-calling snakemake-workflow population-genetics evolve-and-resequence genomic-variant-calling

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259 commits on the default branch (master) since jan '22

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updated: 2024-10-25 @ 01:52pm, id: 261610578 / R_kgDOD5fcUg