moiexpositoalonsolab / grenepipe

A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles.

Date Created 2020-05-06 (4 years ago)

Commits 566 (last one 2 months ago)

Stargazers 87 (0 this week)

Watchers 4 (0 this week)

Forks 21

License gpl-3.0

Ranking

RepositoryStats indexes 565,600 repositories, of these moiexpositoalonsolab/grenepipe is ranked #311,279 (45th percentile) for total stargazers, and #366,616 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #57,387/111,362.

Other Information

moiexpositoalonsolab/grenepipe has Github issues enabled, there are 5 open issues and 50 closed issues.

There have been 19 releases, the latest one was published on 2024-07-19 (2 months ago) with the name grenepipe v0.13.1.

Homepage URL: http://grene-net.org

All Topics

snakemake ancient-dna variant-calls pool-sequencing variant-calling snakemake-workflow population-genetics evolve-and-resequence genomic-variant-calling

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258 commits on the default branch (master) since jan '22

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updated: 2024-09-25 @ 04:00am, id: 261610578 / R_kgDOD5fcUg