11 results found Sort:

dipy
dipy dipy
431
686
other
54
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images....
dki dti python bundles tracking denoising patch2self tractometry neuroanatomy neuroimaging registration segmentation tractography diffusion-mri microstructure medical-imaging machine-learning spherical-harmonics contextual-enhancement self-supervised-learning
Created 2010-02-06
14,083 commits to master branch, last one 13 hours ago
PennLINC
qsiprep PennLINC
54
136
bsd-3-clause
15
Preprocessing and reconstruction of diffusion MRI
python pipelines connectomics tractography diffusion-mri
Created 2018-11-07
624 commits to master branch, last one a day ago
StanfordMIMI
DDM2 StanfordMIMI
20
125
unknown
3
[ICLR2023] Official repository of DDM2: Self-Supervised Diffusion MRI Denoising with Generative Diffusion Models
iclr iclr2023 denoising diffusion-mri diffusion-models
Created 2023-02-04
22 commits to main branch, last one 5 months ago
JuliaHealth
KomaMRI.jl JuliaHealth
16
101
mit
4
Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse s...
mri cardiac diffusion simulation diffusion-mri gpu-acceleration
Created 2020-04-01
1,963 commits to master branch, last one 2 days ago
AthenaEPI
dmipy AthenaEPI
30
95
mit
21
The open source toolbox for reproducible diffusion MRI-based microstructure estimation
noddi axcaliber multi-shell neuroimaging neuroscience optimization diffusion-mri noddi-bingham ball-and-stick ball-and-racket multi-echo-time multi-tissue-csd reproducible-research spherical-mean-technique diffusion-time-dependence microstructure-estimation multi-compartment-modeling microscopic-diffusion-imaging constrained-spherical-deconvolution microstructure-imaging-in-crossings
Created 2017-03-22
919 commits to master branch, last one about a year ago
MICA-MNI
micapipe MICA-MNI
27
78
gpl-3.0
4
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
mri bids awesome connectome multimodal neuroimaging diffusion-mri resting-state microstructure imageprocessing
Created 2020-07-14
1,737 commits to master branch, last one 2 months ago
SlicerDMRI
SlicerDMRI SlicerDMRI
26
75
other
7
Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
3d-slicer neuroimaging tractography diffusion-mri 3d-slicer-extension medical-image-computing
Created 2015-11-20
789 commits to master branch, last one 14 days ago
MIC-DKFZ
MITK-Diffusion MIC-DKFZ
15
71
other
6
MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
dmri peak brain dicom qballs fiberfox tractseg denoising modelling simulation fiber-tracts registration segmentation tractography diffusion-mri mitk-diffusion supplement-181 brainextraction diffusion-tensor diffusion-mri-simulation
Created 2019-07-05
399 commits to master branch, last one 21 days ago
SlicerDMRI
whitematteranalysis SlicerDMRI
32
65
other
7
White matter tractography clustering and more...
dmri neuroimaging tractography white-matter diffusion-mri
Created 2013-10-11
941 commits to master branch, last one 5 months ago
nipreps
dmriprep nipreps
23
63
apache-2.0
13
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
bids bids-apps diffusion-mri preprocessing magnetic-resonance-imaging
Created 2019-03-06
692 commits to master branch, last one 7 months ago
MASILab
Synb0-DISCO MASILab
28
56
unknown
14
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
deep-learning diffusion-mri distortion-correction
Created 2019-03-30
45 commits to master branch, last one 25 days ago