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DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical...
Created
2010-02-06
14,939 commits to master branch, last one a day ago
[ICLR2023] Official repository of DDM2: Self-Supervised Diffusion MRI Denoising with Generative Diffusion Models
Created
2023-02-04
22 commits to main branch, last one about a year ago
Preprocessing of diffusion MRI
Created
2018-11-07
698 commits to master branch, last one 3 days ago
Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse s...
Created
2020-04-01
2,536 commits to master branch, last one 3 days ago
The open source toolbox for reproducible diffusion MRI-based microstructure estimation
noddi
axcaliber
multi-shell
neuroimaging
neuroscience
optimization
diffusion-mri
noddi-bingham
ball-and-stick
ball-and-racket
multi-echo-time
multi-tissue-csd
reproducible-research
spherical-mean-technique
diffusion-time-dependence
microstructure-estimation
multi-compartment-modeling
microscopic-diffusion-imaging
constrained-spherical-deconvolution
microstructure-imaging-in-crossings
Created
2017-03-22
920 commits to master branch, last one 4 months ago
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
Created
2020-07-14
1,741 commits to master branch, last one about a month ago
MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
Created
2019-07-05
400 commits to master branch, last one 7 months ago
Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
Created
2015-11-20
801 commits to master branch, last one about a month ago
White matter tractography clustering and more...
Created
2013-10-11
958 commits to master branch, last one 11 days ago
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Created
2019-03-30
48 commits to master branch, last one 8 months ago
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Created
2019-03-06
692 commits to master branch, last one about a year ago
Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.
Created
2016-08-04
354 commits to master branch, last one about a year ago