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272

975

bsd-3-clause

31

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

ddi ppi qsar covid19 toolkit side-effects deep-learning bioinformatics drug-discovery dti-prediction drug-repurposing repurposing-drugs virtual-screening drug-drug-interaction drug-target-interaction drug-property-prediction drug-target-interactions protein-function-prediction protein-protein-interaction

Created 2020-03-19

529 commits to master branch, last one 5 months ago

9

98

apache-2.0

2

TigerLily: Finding drug interactions in silico with the Graph.

ddi node graph biology embedding tigergraph deep-learning graph-database node-embedding graph-embedding knowledge-graph network-science pharmaceuticals machine-learning gradient-boosting heterogeneous-graph drug-drug-interaction unsupervised-learning graph-machine-learning

Created 2022-02-28

104 commits to main branch, last one about a year ago

14

88

apache-2.0

12

Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)

Created 2021-03-28

214 commits to master branch, last one 2 years ago

20

84

unknown

0

[Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'.

gnn biosnap drugbank subgraph twosides bioinformatics drug-discovery knowledge-graph drug-drug-interaction graph-neural-networks biomedical-knowledge-graph

Created 2020-07-15

12 commits to master branch, last one 3 years ago

2

25

mit

2

Emerging Drug Interaction Prediction Enabled by Flow-based Graph Neural Network with Biomedical Network. Nature Computational Science. 2023.

biomedical-networks drug-drug-interaction graph-neural-networks

Created 2023-10-07

9 commits to main branch, last one about a year ago