6 results found Sort:

aertslab
pySCENIC aertslab
184
458
gpl-3.0
18
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regula...
single-cell transcriptomics transcription-factors gene-regulatory-network
Created 2018-03-07
670 commits to master branch, last one 8 months ago
smorabit
hdWGCNA smorabit
36
371
other
5
High dimensional weighted gene co-expression network analysis
single-cell network-analysis gene-regulatory-network spatial-transcriptomics
Created 2020-08-11
234 commits to dev branch, last one 2 months ago
pinellolab
dictys pinellolab
14
111
agpl-3.0
5
Context specific and dynamic gene regulatory network reconstruction and analysis
dynamic-network network-analysis network-inference single-cell-network single-cell-analysis network-visualization single-cell-multiomics gene-regulatory-network
Created 2022-07-01
91 commits to master branch, last one 5 months ago
netZoo
netZooR netZoo
39
105
gpl-3.0
3
netZooR is a network biology package implemented in R.
transcription-factors gene-regulatory-network
Created 2019-06-06
1,484 commits to master branch, last one 2 months ago
netZoo
netZooPy netZoo
35
79
gpl-3.0
3
netZooPy is a network biology package implemented in Python.
transcription-factors gene-regulatory-network
Created 2019-06-13
1,113 commits to master branch, last one about a month ago
aertslab
SCope aertslab
15
68
gpl-3.0
9
Fast visualization tool for large-scale and high dimensional single-cell data
aws grpc loom cloud reactjs single-cell gene-expression gene-regulatory-network large-scale-data-visualization
Created 2018-02-13
1,617 commits to master branch, last one 3 years ago