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119

501

unknown

14

NicheNet: predict active ligand-target links between interacting cells

rna-seq ligand-target gene-expression ligand-receptor data-integration network-inference single-cell-omics single-cell-rna-seq cell-cell-communication intercellular-communication

Created 2018-02-05

495 commits to master branch, last one 3 months ago

13

154

other

8

Algorithms for quantifying associations, independence testing and causal inference from data.

julia entropy time-series associations causal-graphs cross-mapping hacktoberfest julia-language surrogate-data causal-inference transfer-entropy network-inference mutual-information distance-correlation independence-testing predictive-asymmetry partial-mutual-information conditional-mutual-information

Created 2018-05-30

336 commits to main branch, last one about a month ago

14

111

agpl-3.0

5

Context specific and dynamic gene regulatory network reconstruction and analysis

dynamic-network network-analysis network-inference single-cell-network single-cell-analysis network-visualization single-cell-multiomics gene-regulatory-network

Created 2022-07-01

91 commits to master branch, last one 5 months ago

14

70

mit

3

Cross-platform library for network interface and gateway. Written in Rust.

rust gateway network rust-crate rust-library network-inference

Created 2021-04-10

261 commits to main branch, last one 3 months ago

18

54

gpl-3.0

7

A collection of Poisson lognormal models for multivariate count data analysis

pca r-package count-data network-inference multivariate-analysis poisson-lognormal-model

Created 2017-03-17

1,808 commits to master branch, last one 2 months ago