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medvedevgroup
SibeliaZ medvedevgroup
19
137
other
7
A fast whole-genome aligner based on de Bruijn graphs
genomics alignment bioinformatics de-bruijn-graphs graph-algorithms comparative-genomics whole-genome-alignment locally-collinear-blocks
Created 2017-01-10
406 commits to master branch, last one about a year ago
gsneha26
SegAlign gsneha26
15
62
mit
6
A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043
tbb cuda lastz aws-ec2 genomics genome-aligner gpu-acceleration genome-alignments comparative-genomics whole-genome-alignment
Created 2019-10-26
428 commits to main branch, last one about a year ago