4 results found Sort:

B-UMMI
chewBBACA B-UMMI
28
139
gpl-3.0
17
BSR-Based Allele Calling Algorithm
mlst cgmlst wgmlst bacteria genomics allele-calling bioinformatics bacterial-typing outbreak-detection bacterial-genome-analysis
Created 2017-08-04
1,380 commits to master branch, last one 4 months ago
nmquijada
tormes nmquijada
33
102
gpl-3.0
5
Making whole bacterial genome sequencing data analysis easy
pipeline user-friendly antimicrobial-resistance bacterial-genome-analysis
Created 2018-11-27
261 commits to master branch, last one 2 months ago
nf-core
bactmap nf-core
31
53
mit
144
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
tree mapping nf-core bacteria genomics nextflow pipeline workflow bacterial phylogeny bacterial-genome-analysis
Created 2019-06-09
261 commits to master branch, last one 3 years ago
paulstothard
cgview paulstothard
16
42
gpl-3.0
1
CGView is a Java package for generating high-quality, zoomable maps of circular genomes.
genomics bioinformatics bacterial-genomes bacterial-genome-analysis
Created 2020-06-14
146 commits to master branch, last one 6 months ago