23 results found Sort:

657
1.3k
other
42
MDAnalysis is a Python library to analyze molecular dynamics simulations.
Created 2015-04-04
7,124 commits to develop branch, last one 7 hours ago
163
517
other
42
NWChem: Open Source High-Performance Computational Chemistry
Created 2017-11-19
31,192 commits to master branch, last one 10 days ago
130
474
mit
30
Accurate Neural Network Potential on PyTorch
Created 2018-04-02
434 commits to master branch, last one about a year ago
Molecular simulation in Julia
Created 2018-05-15
1,918 commits to master branch, last one 24 hours ago
75
272
gpl-3.0
45
Tensorflow + Molecules = TensorMol
Created 2016-10-28
1,724 commits to master branch, last one 6 years ago
MoleculeKit: Your favorite molecule manipulation kit
Created 2019-03-28
983 commits to main branch, last one 2 days ago
55
195
mit
24
WESTPA: The Weighted Ensemble Simulation Toolkit with Parallelization and Analysis
Created 2014-09-29
2,028 commits to westpa2 branch, last one 8 days ago
16
191
bsd-3-clause
13
Universal extensible molecular simulation engine
Created 2015-05-25
1,007 commits to master branch, last one 10 months ago
81
176
other
21
A hierarchical, component based molecule builder
Created 2013-10-23
2,702 commits to main branch, last one 2 days ago
78
121
mit
20
A package for atom-typing as well as applying and disseminating forcefields
Created 2015-04-16
931 commits to main branch, last one 11 days ago
A project (and object) for storing, manipulating, and converting molecular mechanics data.
Created 2020-05-15
3,463 commits to main branch, last one 2 days ago
Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
Created 2024-01-18
11 commits to main branch, last one 9 months ago
34
65
mit
10
A Framework for Metropolis Monte Carlo Simulation of Molecular Systems
Created 2013-01-15
3,700 commits to master branch, last one about a month ago
Physical validation of molecular simulations
Created 2017-05-08
459 commits to main branch, last one 5 months ago
Neural relational inference for molecular dynamics simulations
Created 2021-01-30
28 commits to main branch, last one 2 years ago
7
53
gpl-3.0
4
Real time molecular dynamics in the browser using LAMMPS
Created 2021-04-25
250 commits to main branch, last one about a month ago
11
44
gpl-3.0
5
Sire Molecular Simulations Framework
Created 2023-01-06
4,408 commits to devel branch, last one 8 days ago
The architector python package - for 3D metal complex design. C22085
Created 2022-11-30
127 commits to main branch, last one 9 months ago
Virtual chemistry simultaion. Particle automata. Visualization of the behavior of particles in 2D and 3D space. Artifical life research.
Created 2023-04-20
857 commits to master branch, last one 3 days ago