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66

472

mit

15

Get protein embeddings from protein sequences

pipeline embedders bio-embeddings language-model machine-learning protein-sequences protein-structure protein-prediction sequence-embeddings

Created 2019-04-10

1,282 commits to develop branch, last one 2 years ago

31

112

mit

6

Protein Secondary Structure predictor using Convolutional Neural Networks

cnn pdb chain keras cullpdb deep-learning machine-learning protein-structure protein-prediction structure-prediction

Created 2017-12-24

71 commits to master branch, last one about a year ago

8

68

mit

3

ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning

mmseqs2 foldseek protein-alignment protein-annotation protein-prediction sequence-structure protein-pretraining contrastive-learning protein-language-model

Created 2024-05-21

114 commits to main branch, last one 7 days ago

1

32

bsd-3-clause

6

Python framework for interpretable protein prediction

explainability intrepretability machine-learning feature-selection protein-prediction feature-engineering positive-unlabeled-learning intepretable-machine-learning

Created 2022-04-22

690 commits to master branch, last one 5 months ago

4

32

apache-2.0

1

Transmembrane proteins predicted through Language Model embeddings

pytorch deep-learning bioinformatics machine-learning protein-embeddings protein-prediction transmembrane-proteins

Created 2022-05-31

16 commits to main branch, last one 9 months ago