Search Results - RepositoryStats

33

357

mit

6

Saprot: Protein Language Model with Structural Alphabet (AA+3Di)

protein foldseek alphafold2 pretraining protein-llm structure-aware protein-sequence protein-structure structural-alphbet predicted-structures protein-language-model representation-learning

Created 2023-10-02

124 commits to main branch, last one 4 days ago

18

63

gpl-3.0

7

MMseqs2 app to run on your workstation or servers

vue docker golang mmseqs electron foldseek colabfold alphafold2 bioinformatics docker-compose profile-search sequence-search structure-search

Created 2018-04-19

1,019 commits to master branch, last one 6 days ago

8

59

mit

3

ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning

mmseqs2 foldseek protein-alignment protein-annotation protein-prediction sequence-structure protein-pretraining contrastive-learning protein-language-model

Created 2024-05-21

44 commits to main branch, last one about a month ago

2

33

bsd-3-clause

2

A NumPy port of the foldseek code for encoding protein structures to 3di.

foldseek numpy-library python-library protein-structure

Created 2023-11-25

48 commits to main branch, last one about a month ago